Publications

  • Pengyuan Li, Xiangying Jiang, Hagit Shatkay. Extracting figures and captions from biomedical documents. [J] Bioinformatics, 2019, 35(21), 4381-4388.

  • Pengyuan Li, Xiangying Jiang, Chandra Kambhamettu, Hagit Shatkay. Compound image segmentation of published biomedical figures. [J] Bioinformatics, 2018, 34(7), 1192-1199.

  • Pengyuan Li, Xiangying Jiang, Hagit Shatkay. Figure and caption extraction from scientific documents. [C] In Proceedings of the 27th ACM International Conference on Information and Knowledge Management (CIKM2018), 1595-1598.

  • Gongbo Zhang, Debarati Roychowdhury, Pengyuan Li, Heng-Yi Wu, Shijun Zhang, Lang Li, Hagit Shatkay. Identifying experimental evidence in biomedical abstracts relevant to Drug-Drug Interactions. [C] In Proceedings of the 9th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics (BCB2018), 414-418.

  • Pengyuan Li, Xiangying Jiang, Chandra Kambhamettu, Hagit Shatkay. Segmenting compound biomedical figures into their constituent panels. [C] In Proceedings of the 8th Cross-Language Evaluation Forum for European Languages (CLEF2017), 199-210.

  • Wenbo Li, Haiwei Pan, Pengyuan Li, Xiaoqin Xie, Zhiqiang Zhang. A medical image retrieval method based on texture block coding tree. [J] Signal Processing: Image Communication, 2017, 59, 131-139.

  • Gongbo Zhang, Moumita Bhattacharya, Heng-Yi Wu, Pengyuan Li, Lang Li, Hagit Shatkay. Identifying articles relevant to Drug-Drug Interaction: Addressing Class Imbalance. In Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM2017), 1141-1147.

  • Linlin Gao, Haiwei Pan, Qilong Han, Xiaoqin Xie, Zhiqiang Zhang, Xiao Zhai, Pengyuan Li. Finding frequent approximate subgraphs in medical image database. [C] In Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM2015), 1004-1007.

  • Haiwei Pan, Pengyuan Li, Qing Li, Qilong Han, Xiaoning Feng, Linlin Gao. Brain CT image similarity retrieval method based on Uncertain Location Graph. IEEE Journal of Biomedical and Health Informatics, 2014, 18(2):574-584.

  • Pengyuan Li, Haiwei Pan, Jianzhong Li, Qilong Han, Xiaoqin Xie, Zhiqiang Zhang. A novel model for medical image similarity retrieval. [C] In Proceedings of the 14th International Conference on Web-Age Information Management (WAIM2013), 595-606.

  • Rui Wang, Haiwei Pan, Qilong Han, Jingzi Gu, Pengyuan Li. A novel model for medical image similarity retrieval. [C] In Proceedings of the 8th International Conference on Advanced Data Mining and Applications (ADMA2012), 650-662.

  • Haiwei Pan, Pengyuan Li, Xiaoning Feng, Rui Wang, Jingzi Gu. Medical Image Similarity Retrieval Method Based on Uncertain Location Graph. Patent No.: CN103226582A.