Roger Craig

Best way to get a hold of me is:
rog AT udel DIZZOT edu
or
Message me on twitter.

A member of Li Liao's Bioinformatics group, I received my Ph.D. in Winter 2010 from the University of Delaware Computer and Information Sciences department.

Publications:

• Roger A. Craig, Jin Lu, Jinquan Luo, Lei Shi and Li Liao,Optimizing nucleotide sequence ensembles for combinatorial protein libraries using a genetic algorithm, Nucleic Acids Research, 2010, Vol. 38, No. 2 e10

• Roger A. Craig, Keyur Malaviya, Krishna Balasubramanian and Li Liao. Inferring functional linkage from residue level co-evolution information. The International Conference on Bioinformatics and Computational Biology (BioComp08), Las Vegas, Nevada, USA, July, 2008.

• Roger A. Craig and Li Liao, Improving Protein-Protein Interaction Prediction based on Phylogenetic Information using Least-Squares SVM. Annals of The New York Academy of Sciences. Vol. 1115, No. 1, pp. 154, 2007.

• Roger Craig and Li Liao, Phylogenetic Tree Information Aids Supervised Learning for Predicting Protein-Protein Interaction Based on Distance Matrices. BMC Bioinformatics 2007, 8:6.

• Roger Craig and Li Liao, Transductive Learning with EM Algorithm to Classify Proteins Based on Phylogenetic Profiles", Int. J. Data Mining and Bioinformatics 2007, 1:337-351

• Roger Craig and Li Liao, "Prediction of Antisense Oligonucleotide Efficacy Using Local and Global Structure Information With Support Vector Machines", The fifth International Conference on Machine Learning and Applications (ICMLA'06), pp. 199-204, December 2006, Orlando, Florida.

• Roger Craig and Li Liao, "Protein Classification Using Transductive Learning on Phylogenetic Profiles", The 21st Annual ACM Symposium on Applied Computing: Bioinformatics Track. pp. 161-166, April, 2006, Dijon, France.

• Roger Craig and Li Liao, "Iterative Weighting of Phylogenetic Profiles Increases Classification Accuracy", The Fourth International Conference on Machine Learning and Applications (ICMLA'05), pp. 156-161, December, 2005, Los Angeles, California.