- Quazi Abidur Rahman (PhD)
- Layan Nahlawi (Joint supervision with Prof. Parvin Mousavi, PhD)
- Andrew Wong (MSc)
Principal Investigator
|
Dr. Hagit Shatkay Associate Professor |
Current Graduate Students (University of Delaware)
Moumita Bhattacharya PhD student |
Kaidi Ma PhD student |
Ramanuja Simha PhD student |
Ramya Narayanaswamy MS student |
Sanjeev Patra MS student |
Current Graduate Students (Queen's University, Kingston, Ontario)
Graduate Alumni (and their theses)
- Phil Hyoun Lee, PhD, November 2009 (Now at Harvard Medical School)
Thesis: Prioritizing SNPs for Disease-Gene Association Studies: Algorithms and Systems - Rob Denroche, MSc, 2010 (Now at Ontario Institute for Cancer Research)
Thesis: Automatic Identication of Protein Characterization Articles in support of Database Curation - Yin Lam, MSc, 2010 (Now at Varicent)
Thesis: Comparing Naive Bayes Classifiers with Support Vector Machines for Predicting Protein Subcellular Location Using Text Features - Sara Salehi, MSc, 2009 (Now a PhD student at Queen's University)
Thesis: Automated Biomedical Text Fragmentation in support of Biomedical Sentence Fragment Classification - Jess Shen, MSc, November 2007 (Now at US Genomics, Mass.)
Thesis: Using Cluster Analysis, Cluster Validation and Consensus Clustering to Identify Subtypes of Pervasive Developmental Disorders - Scott Brady, MSc, May 2007 (Now at Atum Corporation, Toronto)
Thesis: Text-Based Prediction of Protein Subcellular Location - Fengxia Pan, MSc, November 2006 (Now at Microsoft)
Thesis: Multi-Dimensional Fragment Classification in Biomedical Text
Undergraduate Alumni
- Aleksandra Bragozewska (Genomics of Autism, graduated 2008)
- Ana Maria Crisan (Genomics of Autism, graduated 2008)
- Andrew Wong (Functional SNPs: The F-SNP Database, graduated 2008)
- Paul Bernhardt (NSERC summer student, New Features for BLIMP: a Biomedical LIterature Mining Publications Web Service. Summer 2007)
- Gursev Sidhu (Image-based Text Categorization, graduated 2007)
- Aran Donohue (Abbrev, graduated 2007)
- Scott Brady (Subcellular Localization, graduated 2005. MSc, 2007)
- Christopher Chan (Biomedical Text Mining, graduated 2005. Now an MD student at McGill)
- Kelly Corkum (Biomedical Text Mining, graduated 2005)
- Anirudh Garg (Biomedical Text Mining, NSERC student 2005)
- Denny Kim (Subcellular Localization, graduated 2004)
- Oliver Ng (Relational Database for storing MEDLINE, graduated 2005)
- Matthew Rocheford (Subcellular Localization, graduated 2005)
- John San Miguel (Subcellular Localization, graduated 2005)
- Limin Zhang (BLIMP, graduated 2005)