Journal Papers

Management of High-Throughput DNA Sequencing Projects: Alpheus.

Neil A. Miller, Stephen F. Kingsmore, Andrew D. Farmer, Raymond J. Langley, Joann Mudge, John A. Crow, Alvaro J. González, Faye D. Schilkey,Ryan J. Kim, Jennifer van Velkinburgh, Gregory D. May, C. Forrest Black, M. Kathy Myers, John P. Utsey, Nicholas S. Frost, Selene M. Virk, David J. Sugarbaker, Raphael Bueno, Stephen R. Gullans, Susan M. Baxter, Steve W. Day, and Ernest F. Retzel.

J Comp Sci Syst Biol, 1:132-148, 2008. (PDF)

Clustering exact matches of pairwise sequence alignments by weighted linear regression.

Alvaro J. González and Li Liao.

BMC Bioinformatics, 9:102, 2008. (PDF)

Alpha Stable Modeling of Human Visual Systems for Digital Halftoning in Rectangular and Hexagonal Grids.

Alvaro J. González, Jan Bacca Rodríguez, Gonzalo R. Arce and Daniel L. Lau.

IS&T/SPIE Journal of Electronic Imaging, Vol 17, No 1, 2008. (PDF)

Prototype for Direction of Arrival Estimation implemented in audio frequency.

Alvaro J. González, Paula A. Carrillo and Claudia P. Barrera.

RCA Colombian Magazine of Telecommunications, CINTEL (Centro para Investigación en Telecomunicaciones / Center for Telecommunications Research), 2003.

Conference Papers

Predicting Functional Sites in Biological Sequences Using Canonical Correlation Analysis.

Alvaro J. González, Li Liao and Cathy H. Wu.

BIOCOMP'10 - The 2010 International Conference on Bioinformatics & Computational Biology, Las Vegas, Nevada, July 2010, pp. 269-273.

Acceptance rate: 27.0%. (PDF) (Slides) (Poster, presented at BIBM'09)

Constrained Fisher Scores Derived from Interaction Profile Hidden Markov Models Improve Protein-Protein Interaction Prediction.

Alvaro J. González and Li Liao.

1st International Conference on Bioinformatics and Computational Biology, New Orleans, Louisiana, April 2009, pp. 236-247.

Acceptance rate: 30/72 (41.7%). (PDF) (Slides)

Alpha Stable Human Visual System Models for Digital Halftoning.

Alvaro J. González, Jan Bacca Rodríguez, Gonzalo R. Arce and Daniel L. Lau.

IS&T/SPIE 18th Annual Symposium, San Jose, California, January 2006. (PDF)

Optimal Halftoning Over Hexagonal Grids.

Jan Bacca Rodríguez, Alvaro J. González, Gonzalo R. Arce and Daniel L. Lau.

IS&T/SPIE 18th Annual Symposium, San Jose, California, January 2006. (PDF)

Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines.

Alvaro J. González and Li Liao.

BMC Bioinformatics, 11:537, 2010.

Predicting ligand binding residues using multi-positional correlations and kernel canonical correlation analysis.

Alvaro J. González, Li Liao and Cathy H. Wu.

BIBM'10 - The 2010 IEEE International Conference on Bioinformatics and Biomedicine, Hong Kong, December 2010, pp. 158-163.

Acceptance rate: 61/355 (17.2%). (PDF) (Slides)